.. java:import:: ch.epfl.leb.defcon.predictors Predictor

.. java:import:: ch.epfl.leb.defcon.predictors.internal DefaultPredictor

.. java:import:: ch.epfl.leb.defcon.predictors SessionClosedException

.. java:import:: ch.epfl.leb.defcon.predictors ImageBitDepthException

.. java:import:: ch.epfl.leb.defcon.predictors UninitializedPredictorException

.. java:import:: ij IJ

.. java:import:: ij ImagePlus

.. java:import:: ij.gui Roi

.. java:import:: ij.measure ResultsTable

.. java:import:: ij.plugin.filter PlugInFilter

.. java:import:: ij.process ImageProcessor

.. java:import:: ij WindowManager

.. java:import:: ij ImageStack

DensityCount
============

.. java:package:: ch.epfl.leb.defcon.ij
   :noindex:

.. java:type:: public class DensityCount implements PlugInFilter

   Computes a density map estimate for counting objects within an image.

   :author: Baptiste Ottino

Methods
-------
run
^^^

.. java:method:: public void run(ImageProcessor ip)
   :outertype: DensityCount

   Computes a density map from the selected image stack. A results table that indicates the count is displayed in addition to the density map image.

   :param ip: The input image processor.

setup
^^^^^

.. java:method:: public int setup(String pathToModel, ImagePlus imp)
   :outertype: DensityCount

   Sets up the PlugInFilter.

   :param pathToModel: The path to a saved TensorFlow model bundle.
   :param imp: The currently active image.
   :return: A flag indicating which types of images this plugin handles.

   **See also:** \ `PlugInFilter <https://imagej.nih.gov/ij/developer/api/ij/plugin/filter/PlugInFilter.html>`_\